Computational Research assistant

Do you want to contribute to top quality medical research?

The Department of Microbiology, Tumor and Cell Biology (MTC) at Karolinska Institutet conducts research and teaching within immunology, infection biology, cell biology and cancer. MTC has about 40 research groups and our key words are multidisciplinary, bridging, national and international collaborations.

The Murrell lab, at MTC, KI, is a mixed computational and experimental lab working at the intersection of computational biology, virology, immunology, and evolution. See here for recent work: https://scholar.google.com/citations?user=I80vy5cAAAAJ&sortby=pubdate

Current projects involve antibody discovery, vaccine design, building models of molecular evolution, and various applications of deep learning.

Your mission

Duties of this role involve:

Contributing to a Julia package for next generation sequence analysis.
Setting up tests and documentation.
Maintaining and developing codebases and packages in the Julia language.

Your profile

Experience with Python, C++, and especially Julia
Demonstrable coding experience, with code available on public repositories
Some experience with analysis of viral next generation sequencing data
Experience with sequence alignment algorithms, especially involving kmers
Experience and familiarity with the Sequence Read Archive
Experience with large language models
Ability to communicate clearly in English

What do we offer?

A creative and inspiring environment with wide-ranging expertise and interests. Karolinska Institutet is one of the world's leading medical universities. Our vision is to pursue the development of knowledge about life and to promote a better health for all. At Karolinska Institutet, we conduct successful medical research and hold the largest range of medical education in Sweden. Karolinska Institutet is also a state university, which entitles you to several good benefits through our collective agreement. And you get to practice freely in our modern wellness facilities, where trained staff are on site.

Location: Solna

Application

The application is to be submitted through the Varbi recruitment system.In this recruitment, you will apply with your CV without a personal letter. Instead, you will answer some questions about why you are applying for the job in the application form.

Want to make a difference? Join us and contribute to better health for all